Getting Started
Environment Variables
It is neccessary to have the following pgplot environments
delared (this is most practical if you add the definitions to your login
shell, the example here is with cshell on the local 'JAZZ' SGI)
setenv PGPLOT_FONT ~taner/mathdir/pgplot/grfont.dat
setenv PGPLOT_DIR ~taner/mathdir/pgplot
alias xtreat ~taner/xtreat2/xtreat.tcl
alias tanqens ~taner/bin/tanqens-vs01.tcl
Files
To retrieve FCS data files from TOF2 and convert them into readable ASCII
format, just press the 'Get File From TOF2' button. This opens another
window where you are required to enter the directory on TOF2 where the
files are, and the filename (with no .fcs exension). The resulting file
is then automatically FTP'ed to your current directory. Upon closing this
window the filename is automatically taken as the input for the rest of
the program.
If you have already converted FCS binary data files to ASCII format
and have them stored locally, use the file browser or directly type the
required filename for analysis into the supplied space. For the latter
option, if the file does not reside in the directory from which you launched
XTREAT you must include the full path.
